Leptin Receptors: Genetics and Hunger

Do you wonder why other people don’t seem to struggle with wanting to eat more? Ever wished your body could just naturally know that it has had enough food and turn off the desire to eat? It could be that you carry a genetic variant in the leptin receptor gene which is linked to not feeling as full or satisfied by your meal – and thus tend to eat just a little bit more. This may have been a survival advantage when times were lean and the only things to eat were unappetizing. Not the case in our modern era with highly palatable foods in easy abundance!

This article dives into the science of appetite, covering leptin, genetics, and why some people don’t get the ‘full’ signal to stop eating. The article wraps up with research-backed ideas for hacking the leptin signal to reduce weight gain.

What is leptin?

Leptin is a hormone that is produced mainly in your fat cells (adipocytes). Leptin signals to your hypothalamus (in the brain) that you have enough stored energy already and don’t need to eat.

Leptin is the full signal, and it opposes ghrelin, the ‘hunger hormone’. Together, these two hormones regulate appetite and balance energy expenditure in the body.

When you go on a low-calorie diet, often your leptin levels will increase. This tells your brain that you are in starvation and need to conserve energy — lowering your metabolic rate. One way by which this happens is through leptin causing a decrease in thyroid hormone levels.

Leptin in the brain:

Leptin is the signaling hormone, and that signal has to be received by the neuronal cells.  For people who are overweight or obese, there is usually plenty of leptin being produced in the fat cells, but often the leptin signal is not being received. Some researchers theorize that people can be leptin resistant –– when your brain stops getting the signal that you are at the right level of stored energy.

Digging deeper into this…
Neurons in the hypothalamus have leptin receptors and receive the signal from circulating leptin.

Specifically, the leptin receptors on the POMC and CART neurons cause the release of α-melanocyte-stimulating hormone (α-MSH) which in turn activates the melanocortin-4  receptor (MC4R gene). This induces the production of the appetite-suppressing peptides. Cocaine- and amphetamine-regulated transcript (CART) and POMC are both neuropeptide proteins that are involved in energy regulation in the hypothalamus.[ref]

CART causes suppression of appetite through leptin — and this is also probably why cocaine and methamphetamine both cause appetite suppression. (No, this is not a good weight loss solution!)[ref]

MC4R is the receptor activated by alpha-MSH. Genetic variants in MC4R are also tied to obesity.

The other signals that the leptin receptor activates – neuropeptide Y and agouti-related protein – reduces the amount of hunger signal. This is like putting the breaks on the hunger signal.

Thus, leptin in the brain stops hunger (neuropeptide Y) and increases the satiety (alpha-MSH).

What happens when the leptin receptor has a mutation?

Genetically obese mouse due to leptin deficiency

There is a very small percentage of people who are overweight because they don’t produce enough of the leptin hormone and never feel full.[ref]  So not producing enough of the signal (leptin) drives a craving for more and more food. Again – these mutations are rare.

The other side of that coin is having a rare mutation that practically eliminates the function of the leptin receptor. These mutations also cause people to be ‘hyperphagic’ — or insatiably hungry – because the signal isn’t being received in the brain.[ref]  Again – this is not common.

Interestingly, to create obese mice for use in studies on obesity, diabetes, and dyslipidemia, scientists created a mouse strain called db/db, which are bred to have a mutation in the leptin receptor.

The more common leptin receptor gene variants are tied to an increased risk of being overweight, but these variants don’t cause the extreme hyperphagia that the rare mutations cause.

These more common variants are likely to increase your weight – somewhat – through increasing appetite and decreasing metabolism –a little bit.

Leptin Resistance

The leptin receptor genetic variants that are tied to increased weight may also exacerbate leptin resistance.

Leptin resistance is when the hypothalamus doesn’t receive all of the leptin signals. Researchers don’t have all the answers, yet, as to why leptin resistance occurs. Current theories on leptin resistance include:

  • Leptin resistance may be due to a decreased amount of leptin that can cross the blood-brain barrier and reach the hypothalamus.
  • It could be due to signaling problems within the neurons — perhaps due to inflammation.

Here is a great new review paper on the topic if you want to dig into this more: Leptin resistance: underlying mechanisms and diagnosis.

What else does leptin do? 

Leptin as a signaling molecule does more than just regulate appetite. Instead, it is important in several biological functions that, when you think about it, make sense to rely on a signal for having enough food to eat.

Fertility and Menstrual Cycles:  Leptin also impacts reproductive hormones in women. It is a signal in the hypothalamus that there is enough fuel available to support pregnancy. This makes sense from an evolutionary point of view — you only want to reproduce when you have enough fuel available. Leptin acts as a signaling molecule in the hypothalamic-pituitary-gonadal axis. [ref]

Low leptin levels, such as when someone is very thin, can cause amenorrhea, or lack of menstrual cycle. In fact, in about 30% of women, these low levels might be the cause of their amenorrhea.[ref]

Too much leptin, on the other hand, causes girls to start menstruating earlier. It also can cause infertility due to ovarian follicles not developing correctly.[ref]

During pregnancy: Additionally, high leptin levels are associated with preeclampsia during pregnancy. Leptin is also secreted by the placenta, which is why leptin levels (and thus hunger) increase during pregnancy.[ref]

Leptin resistance and depression:  In men and women with type 2 diabetes, high leptin levels correlate with depression and anxiety. People with higher leptin levels, indicative of leptin resistance, were at a 5-fold increased risk for depression or anxiety.[ref]

Sleep, circadian rhythm, and leptin:  Melatonin and leptin are inter-related. Melatonin is more than just a ‘sleep hormone’. Levels rise at night and act as a signaling molecule in quite a few circadian dependent processes. Decreased melatonin levels have been shown to lead to leptin resistance. Animal studies show that adding melatonin ameliorates the leptin resistance. [ref]

What causes decreased melatonin? Exposure to light at night in the blue wavelengths. Try turning off overhead lights and shutting off the electronics (TV, phone, laptop) a couple of hours before bed.

Immune system: Leptin also is important in immune response, and immune system cells, such as macrophages, have leptin receptors.  Low leptin levels, signaling a lack of food, generally increases the susceptibility to several infectious diseases. At the same time, some pathogens actually alter leptin levels, which then allows the pathogen to encounter less resistance from the immune system. [ref]

Genetic variants of the LEPR gene:

The LEPR gene codes for the leptin receptor.

Most of the genetic variants below are very common; in fact, up to half of some populations carry the variant. So while leptin receptors may play a role in obesity, if genetics were completely to blame, half the population would be overweight. (Wait, that actually is the case…  In the US, 68% of the population is now considered overweight or obese.[ref]  Still, these variants aren’t the only cause of obesity.)

Check your genetic data for rs1137101 Q223R (23andMev 4, v5 ; AncestryDNA):

  • A/A: typical
  • A/G: increased risk of: overweight /obese; diabetes; PCOS; thyroid cancer; NAFLD;
  • G/G: increased risk of: overweight /obese[ref]; diabetes[ref]; PCOS [ref]; weight gain on antipsychotic meds[ref]; greater muscle gain with weight training[ref]; thyroid cancer[ref]; risk of nonalcoholic fatty liver disease [ref];  lower risk of breast cancer [ref]

Check your genetic data for rs1137100 K109R (23andMe v4, v5; AncestryDNA):

  • A/A: typical
  • A/G: somewhat increased risk of obesity, diabetes
  • G/G: increased risk of obesity, diabetes[ref][ref]; higher odds of severe preeclampsia [ref]; risk of nonalcoholic fatty liver disease, but lower fibrosis score [ref]; obesity in Indian children [ref]; lower risk of breast cancer [ref][ref]

Check your genetic data for rs7799039 (23andMe v4, v5):

  • A/A: increased risk of obesity [ref]; increased risk of MS[ref]
  • A/G: increased risk of obesity
  • G/G: typical

Check your genetic data for rs3790433  (23andMe v4; AncestryDNA):

  • C/C: typical
  • C/T: decreased risk of insulin resistance, metabolic syndrome
  • T/T: decreased risk of insulin resistance, metabolic syndrome[ref]


Simple changes to food timing and food choices may make a difference for people who carry the leptin receptor variants.

Reduce Omega 6 Fats:

A human study found that those with LEPR variants who had higher insulin concentrations and higher insulin resistance, the increased risk was modified by the ratio of omega 6: omega 3 fats in their diet. Only those who had a low omega 3 and high omega 6 levels had an increased risk of metabolic syndrome.[ref]
A low-fat, high complex carbohydrate diet for 12 weeks enhanced insulin sensitivity and reduced insulin resistance only in those with the variant and who also supplemented with 1.24g/day of omega-3 fats.  Those on the low-fat, high complex carb diet alone or when supplementing with monounsaturated fats had no increase in insulin sensitivity.[ref]

Don’t do severe calorie restriction:

Calorie or food restriction doesn’t work well for weight loss in db/db mice (bred to have LEPR mutation). In fact, after six weeks of food restriction, db/db mice also had higher plasma glucose levels.[ref]

Timing of Food:

A recent mouse study found that eating during their inactive period (daytime for the mice, nighttime for us humans) caused leptin resistance and increased obesity and metabolic syndrome. Leptin levels fluctuate over the course of a day (circadian rhythm) and eating at the wrong time seems to cause big problems.[ref]  For people, this may mean that not eating at night will help reduce leptin resistance. Try eating dinner a little earlier and cutting out the bedtime snack.

Sleep and Light at Night:

Leptin, like most of our hormones, has a daily rhythm that is impacted by sleep and light. Melatonin plays a key role in leptin levels.[ref][ref]  Read through Color TV is Making Us Fat: Melatonin, Genetics, and Light at Night for more information. Seriously consider blocking blue light at night with blue-blocking glasses.

A finding in a recent study linked the amount of sleep you get with leptin levels. The study included more than 1,000 people and found that those who slept 5 hours or less at night had a 15% decrease in leptin levels and a 14% increase in ghrelin. They were (quite logically) more likely to be overweight. [ref]


Ashwagandha, an adaptogenic Ayurvedic herb, appears to be a leptin sensitizer. A 2016 mouse study found that one of the constituents of ashwagandha, withaferin A, reduced diet-induced obesity by 25%.[ref]  Human trials have found ashwagandha (300 mg) somewhat effective in weight loss (~5lbs in two months) for people under chronic stress.[ref]  You can purchase Ashwagandha as a powdered herb or in capsules. Ashwagandha has a fairly strong herbal taste so you may want it in a capsule.


A recent mouse study found that a bioactive component of ginseng, ginsenoside Rb1, improved leptin sensitivity and signaling in fat mice.[ref] There are quite a few studies showing weight loss in mice/rats with ginseng, but not nearly as many in humans.[ref] One study in middle-aged females found an average weight loss of a few pounds after two months.[ref] You can also buy Panex Ginseng in powder or capsules.


An alkaloid found in goldenseal, barberry, and Oregon grape, berberine has been used traditionally in many herbal supplements for its anti-diabetic effects. One study (human) found improved leptin ratios as well as decreased BMI after three months of berberine (300mg/3x per day).  Berberine is available as a supplement.[ref]


This Lifehack is something to look into (not necessarily something I wholeheartedly recommend).  Animal studies show that rapamycin normalizes leptin levels and reduces obesity due to aging.  “Our data suggest that the dosing schedule of rapamycin acts on peripheral targets to inhibit mTORC1 signaling, preferentially reducing adiposity and sparing lean mass in an aged model of obesity resulting in favorable outcomes on blood triglycerides, increasing lean/fat ratio, and normalizing elevated serum leptin with age.” [ref]

Related Genes and Topics

FTO Gene

The FTO gene is nick-named the ‘fatso gene’ because of its association with obesity. This article digs into the current research on the FTO gene and then will give you some science-based options for controlling your weight if you carry the FTO genetic variant.

MC4R- Growing Up Big Boned

There are several key players in our body’s regulation of hunger, satiety, and energy expenditure. Leptin and ghrelin are two pivotal hormones involved in our desire to eat. Within that leptin pathway, another key regulator of our body weight is MC4R.



Author Information:   Debbie Moon
Debbie Moon is the founder of Genetic Lifehacks. She holds a Master of Science in Biological Sciences from Clemson University. Debbie is a science communicator who is passionate about explaining evidence-based health information. Her goal with Genetic Lifehacks is to bridge the gap between scientific research and the lay person's ability to utilize that information. To contact Debbie, visit the contact page.